Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF9BB2RNN3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 OR8S1-201ENST00000310194 1080 ntBASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 FAM58CP-201ENST00000435741 640 ntBASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 AL359881.2-201ENST00000602973 570 ntBASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF9BB2RNN3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C1QTNF9BB2RNN3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
C1QTNF9BB2RNN3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C1QTNF9BB2RNN3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.96■□□□□ 0.3
C1QTNF9BB2RNN3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
C1QTNF9BB2RNN3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 AC002472.2-201ENST00000442739 958 ntBASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 AC004817.3-201ENST00000602957 2129 ntBASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF9BB2RNN3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 AC004461.1-201ENST00000412461 403 ntBASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 AC079776.2-201ENST00000641154 1609 ntBASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF9BB2RNN3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms