Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PVRIG2P-201ENST00000435460 978 ntBASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM6-TRIM34B2RNG4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AP000997.3-201ENST00000623333 2250 ntBASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC006011.2-201ENST00000621313 1158 ntBASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC068880.1-201ENST00000507289 2297 ntBASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SPDYE15P-201ENST00000424157 909 ntBASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 NOC2LP2-201ENST00000407594 1944 ntBASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AK4P3-201ENST00000418260 669 ntBASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 AC093010.1-201ENST00000473625 1624 ntBASIC22.17■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM6-TRIM34B2RNG4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM6-TRIM34B2RNG4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM6-TRIM34B2RNG4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM6-TRIM34B2RNG4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM6-TRIM34B2RNG4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TRIM6-TRIM34B2RNG4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms