Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 LINC00167-201ENST00000530583 1419 ntBASIC14.3□□□□□ -0.12
LINC01548A6NM66 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.29□□□□□ -0.12
LINC01548A6NM66 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 MIR3180-1-201ENST00000580374 94 ntBASIC14.29□□□□□ -0.12
LINC01548A6NM66 MIR3180-3-201ENST00000584616 94 ntBASIC14.29□□□□□ -0.12
LINC01548A6NM66 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 AC124864.1-201ENST00000623408 392 ntBASIC14.29□□□□□ -0.12
LINC01548A6NM66 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01548A6NM66 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01548A6NM66 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 CHCHD2P8-201ENST00000429873 447 ntBASIC14.28□□□□□ -0.12
LINC01548A6NM66 KRT18P1-202ENST00000452408 1331 ntBASIC14.28□□□□□ -0.12
LINC01548A6NM66 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 BICD1-207ENST00000551848 1962 ntBASIC14.28□□□□□ -0.12
LINC01548A6NM66 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 AP002414.4-201ENST00000589764 1148 ntBASIC14.28□□□□□ -0.12
LINC01548A6NM66 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01548A6NM66 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINC01548A6NM66 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC01548A6NM66 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01548A6NM66 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms