Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 AC103702.1-201ENST00000548801 2630 ntBASIC19.67■□□□□ 0.74
CCDC66A2RUB6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 AL499627.1-201ENST00000569373 2188 ntBASIC19.66■□□□□ 0.74
CCDC66A2RUB6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 RN7SL471P-201ENST00000580476 299 ntBASIC19.66■□□□□ 0.74
CCDC66A2RUB6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC66A2RUB6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.65■□□□□ 0.74
CCDC66A2RUB6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 AC011676.5-201ENST00000624864 2660 ntBASIC19.65■□□□□ 0.74
CCDC66A2RUB6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC66A2RUB6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC66A2RUB6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC66A2RUB6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC66A2RUB6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC66A2RUB6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC66A2RUB6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC66A2RUB6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 KSR1P1-201ENST00000446298 240 ntBASIC19.64■□□□□ 0.73
CCDC66A2RUB6 AP002982.1-201ENST00000492365 877 ntBASIC19.64■□□□□ 0.73
CCDC66A2RUB6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 AC112777.1-201ENST00000540175 1423 ntBASIC19.64■□□□□ 0.73
CCDC66A2RUB6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms