Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV3S1A0A5B6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 GPAT2P1-201ENST00000444924 1672 ntBASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 NIFKP9-201ENST00000419265 221 ntBASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 AC008040.2-201ENST00000461049 708 ntBASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 AC098934.4-201ENST00000564127 592 ntBASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 AC100803.2-201ENST00000562459 1963 ntBASIC16.97■□□□□ 0.31
TCRBV3S1A0A5B6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 HLA-J-201ENST00000462773 1622 ntBASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms