Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 AL163051.1-201ENST00000569214 1512 ntBASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 MIR149-201ENST00000384879 89 ntBASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 SLC29A4P1-201ENST00000398760 971 ntBASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 CROCCP5-201ENST00000436658 830 ntBASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 AC083880.1-201ENST00000608266 535 ntBASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRDV1A0A1B0GX56 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.14
TRDV1A0A1B0GX56 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.96■□□□□ 0.14
TRDV1A0A1B0GX56 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TRDV1A0A1B0GX56 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRDV1A0A1B0GX56 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRDV1A0A1B0GX56 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 AC022517.1-201ENST00000592429 346 ntBASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.95■□□□□ 0.14
TRDV1A0A1B0GX56 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 GUSBP6-202ENST00000438529 1198 ntBASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 AC008622.2-201ENST00000617006 1229 ntBASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms