Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 AF186996.4-201ENST00000467186 377 ntBASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 AC008608.2-201ENST00000606089 416 ntBASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX11Q9Y5W9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 AC117500.6-201ENST00000624871 588 ntBASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 AC099343.3-201ENST00000605834 2503 ntBASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX11Q9Y5W9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
SNX11Q9Y5W9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX11Q9Y5W9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms