Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 IGHV3-47-201ENST00000425060 335 ntBASIC17.05■□□□□ 0.32
CTSFQ9UBX1 AC111152.3-201ENST00000569699 673 ntBASIC17.05■□□□□ 0.32
CTSFQ9UBX1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 NSUN5P1-202ENST00000421140 1535 ntBASIC17.05■□□□□ 0.32
CTSFQ9UBX1 NSUN5P2-203ENST00000457352 1529 ntBASIC17.05■□□□□ 0.32
CTSFQ9UBX1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSFQ9UBX1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 TSPY19P-201ENST00000418461 509 ntBASIC17.04■□□□□ 0.32
CTSFQ9UBX1 AC246785.2-201ENST00000432512 513 ntBASIC17.04■□□□□ 0.32
CTSFQ9UBX1 TSPY18P-201ENST00000441642 509 ntBASIC17.04■□□□□ 0.32
CTSFQ9UBX1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 IFNL4P1-201ENST00000607083 540 ntBASIC17.04■□□□□ 0.32
CTSFQ9UBX1 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.04■□□□□ 0.32
CTSFQ9UBX1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 AC073592.3-201ENST00000625118 1834 ntBASIC17.04■□□□□ 0.32
CTSFQ9UBX1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 WIZP1-201ENST00000531444 2299 ntBASIC17.04■□□□□ 0.32
CTSFQ9UBX1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.04■□□□□ 0.32
CTSFQ9UBX1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 TPM4P1-201ENST00000436100 807 ntBASIC17.03■□□□□ 0.32
CTSFQ9UBX1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 RN7SL510P-201ENST00000581311 263 ntBASIC17.03■□□□□ 0.32
CTSFQ9UBX1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTSFQ9UBX1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms