Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 IGHGP-201ENST00000390555 1178 ntBASIC15.3■□□□□ 0.04
RNF7Q9UBF6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 GPR32P1-201ENST00000601788 811 ntBASIC15.3■□□□□ 0.04
RNF7Q9UBF6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF7Q9UBF6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 AC005332.1-201ENST00000577698 1310 ntBASIC15.29■□□□□ 0.04
RNF7Q9UBF6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 PCED1CP-201ENST00000419887 785 ntBASIC15.29■□□□□ 0.04
RNF7Q9UBF6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 AC005332.3-201ENST00000589904 676 ntBASIC15.29■□□□□ 0.04
RNF7Q9UBF6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.29■□□□□ 0.04
RNF7Q9UBF6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF7Q9UBF6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 PKD1P1-201ENST00000458669 6805 ntBASIC15.28■□□□□ 0.04
RNF7Q9UBF6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 BICD1-207ENST00000551848 1962 ntBASIC15.28■□□□□ 0.04
RNF7Q9UBF6 AL096828.2-201ENST00000567259 1965 ntBASIC15.28■□□□□ 0.04
RNF7Q9UBF6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF7Q9UBF6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms