Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.89■□□□□ 0.61
DNMT3BQ9UBC3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 BX323043.1-201ENST00000641006 1765 ntBASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 CROCCP3-202ENST00000420820 1947 ntBASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 AC005082.1-201ENST00000413042 2259 ntBASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3BQ9UBC3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 KRT18P65-201ENST00000439811 1286 ntBASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 RPL13AP23-201ENST00000480739 586 ntBASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 KRT18P58-201ENST00000527480 1120 ntBASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 AL031598.1-201ENST00000561511 1773 ntBASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 AP005117.1-201ENST00000584346 1413 ntBASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 AIRN-201ENST00000601203 4374 ntBASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.87■□□□□ 0.61
DNMT3BQ9UBC3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 LETM1P2-201ENST00000597330 2178 ntBASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms