Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 AC138028.4-201ENST00000564984 1845 ntBASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 AC087499.1-201ENST00000418141 1075 ntBASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 MIR3180-5-201ENST00000583743 153 ntBASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 AC010653.2-201ENST00000623505 997 ntBASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CTPS2Q9NRF8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 AP000997.3-201ENST00000623333 2250 ntBASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 AL096828.2-201ENST00000567259 1965 ntBASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS2Q9NRF8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 LINC01568-207ENST00000641790 1380 ntBASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 ECEL1P2-202ENST00000465689 757 ntBASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS2Q9NRF8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms