Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 RPS2P28-201ENST00000314255 741 ntBASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 RPSAP43-201ENST00000402237 625 ntBASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 MED15P5-201ENST00000423150 992 ntBASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 FAM197Y3-203ENST00000618346 717 ntBASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 WIZP1-201ENST00000531444 2299 ntBASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 GPX1P2-201ENST00000429271 606 ntBASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 AC113404.2-201ENST00000507884 177 ntBASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM7Q9NR12 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 AP001269.4-201ENST00000609611 512 ntBASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.22■□□□□ 0.83
PDLIM7Q9NR12 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 AC004408.2-201ENST00000623613 2777 ntBASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms