Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 BNIP3P18-201ENST00000593976 575 ntBASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 AC090164.3-201ENST00000610780 2143 ntBASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SH2D2AQ9NP31 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SH2D2AQ9NP31 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.46■□□□□ 0.22
SH2D2AQ9NP31 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.46■□□□□ 0.22
SH2D2AQ9NP31 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SH2D2AQ9NP31 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC099336.1-202ENST00000602961 463 ntBASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AL138831.2-201ENST00000606564 490 ntBASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AL096828.2-201ENST00000567259 1965 ntBASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 AC135776.1-201ENST00000319817 2481 ntBASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH2D2AQ9NP31 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 POM121L3P-201ENST00000419331 1163 ntBASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 KRT18P31-201ENST00000506277 1292 ntBASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 UNC93B7-201ENST00000509439 705 ntBASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 AL732292.2-201ENST00000609649 430 ntBASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 AL121772.3-201ENST00000610840 674 ntBASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 AC125634.1-201ENST00000438758 1403 ntBASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH2D2AQ9NP31 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms