Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 MYC-209ENST00000641252 345 ntBASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 KRT8P41-201ENST00000533985 1514 ntBASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 AC092437.1-201ENST00000624794 1048 ntBASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SND1-IT1Q9HBX3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 NBPF21P-201ENST00000425093 1451 ntBASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 KRT8P32-201ENST00000512863 1461 ntBASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.17□□□□□ -0.46
SND1-IT1Q9HBX3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms