Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 GPAT2P1-201ENST00000444924 1672 ntBASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 AC093525.10-201ENST00000625130 1569 ntBASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 IFNL4P1-201ENST00000607083 540 ntBASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1BQ9H9Y6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 AP000347.1-202ENST00000435868 847 ntBASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
POLR1BQ9H9Y6 AC036111.1-201ENST00000533973 1582 ntBASIC17.96■□□□□ 0.46
POLR1BQ9H9Y6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 AC104417.2-201ENST00000562989 1793 ntBASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 AL161938.1-201ENST00000569833 2180 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms