Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 LIN28AP1-201ENST00000429574 405 ntBASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 PVRIG2P-201ENST00000435460 978 ntBASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 AL157888.1-201ENST00000631930 593 ntBASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC40Q9H9A6 AC134043.2-201ENST00000624206 2238 ntBASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 AP000997.3-201ENST00000623333 2250 ntBASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 ATP5G1P1-201ENST00000448724 379 ntBASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 AC034232.1-201ENST00000506026 1064 ntBASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 GCSHP2-201ENST00000560971 527 ntBASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 AC133561.5-201ENST00000635547 218 ntBASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC40Q9H9A6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms