Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 AC009533.2-201ENST00000543664 586 ntBASIC21.12■□□□□ 0.97
SH2D4AQ9H788 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 AC005336.2-201ENST00000593183 939 ntBASIC21.12■□□□□ 0.97
SH2D4AQ9H788 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D4AQ9H788 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 AC064862.7-201ENST00000604520 867 ntBASIC21.11■□□□□ 0.97
SH2D4AQ9H788 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SH2D4AQ9H788 GMCL1P1-201ENST00000463439 1581 ntBASIC21.1■□□□□ 0.97
SH2D4AQ9H788 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.1■□□□□ 0.97
SH2D4AQ9H788 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 TP73-AS1-210ENST00000637775 1455 ntBASIC21.09■□□□□ 0.97
SH2D4AQ9H788 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 SLC25A6P4-201ENST00000586535 553 ntBASIC21.09■□□□□ 0.97
SH2D4AQ9H788 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SH2D4AQ9H788 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SH2D4AQ9H788 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
SH2D4AQ9H788 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms