Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF38Q9H0F5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RNF38Q9H0F5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
RNF38Q9H0F5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF38Q9H0F5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF38Q9H0F5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF38Q9H0F5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF38Q9H0F5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 RCN1P2-201ENST00000398357 915 ntBASIC18.76■□□□□ 0.59
RNF38Q9H0F5 AC096582.2-201ENST00000510860 516 ntBASIC18.76■□□□□ 0.59
RNF38Q9H0F5 AF238378.1-201ENST00000526806 358 ntBASIC18.76■□□□□ 0.59
RNF38Q9H0F5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF38Q9H0F5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 AC093503.3-201ENST00000624917 2352 ntBASIC18.75■□□□□ 0.59
RNF38Q9H0F5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.75■□□□□ 0.59
RNF38Q9H0F5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 AL591684.3-201ENST00000605187 298 ntBASIC18.75■□□□□ 0.59
RNF38Q9H0F5 REXO1L6P-202ENST00000619970 1078 ntBASIC18.75■□□□□ 0.59
RNF38Q9H0F5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 TP73-AS1-210ENST00000637775 1455 ntBASIC18.75■□□□□ 0.59
RNF38Q9H0F5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF38Q9H0F5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 PHGDH-209ENST00000641074 1780 ntBASIC18.74■□□□□ 0.59
RNF38Q9H0F5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 AL121912.1-201ENST00000603683 238 ntBASIC18.74■□□□□ 0.59
RNF38Q9H0F5 AL138831.2-201ENST00000606564 490 ntBASIC18.74■□□□□ 0.59
RNF38Q9H0F5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF38Q9H0F5 WIZP1-201ENST00000531444 2299 ntBASIC18.74■□□□□ 0.59
RNF38Q9H0F5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms