Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 AL391807.1-203ENST00000604392 2365 ntBASIC12.65□□□□□ -0.38
UPK3BQ9BT76 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 MIR662-201ENST00000384847 95 ntBASIC12.65□□□□□ -0.38
UPK3BQ9BT76 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK3BQ9BT76 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
UPK3BQ9BT76 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
UPK3BQ9BT76 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.65□□□□□ -0.39
UPK3BQ9BT76 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AC079602.3-201ENST00000623931 403 ntBASIC12.64□□□□□ -0.39
UPK3BQ9BT76 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AC104581.1-202ENST00000635932 2618 ntBASIC12.64□□□□□ -0.39
UPK3BQ9BT76 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 AC093525.10-201ENST00000625130 1569 ntBASIC12.64□□□□□ -0.39
UPK3BQ9BT76 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.64□□□□□ -0.39
UPK3BQ9BT76 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
UPK3BQ9BT76 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms