Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 AP000867.3-201ENST00000524675 377 ntBASIC14.13□□□□□ -0.15
DUX3Q96PT4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 AC024563.2-201ENST00000603282 481 ntBASIC14.13□□□□□ -0.15
DUX3Q96PT4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 IGHV3-41-201ENST00000613121 348 ntBASIC14.12□□□□□ -0.15
DUX3Q96PT4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.12□□□□□ -0.15
DUX3Q96PT4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DUX3Q96PT4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 AP000974.1-201ENST00000623909 2387 ntBASIC14.11□□□□□ -0.15
DUX3Q96PT4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 TOB2P1-201ENST00000469761 992 ntBASIC14.11□□□□□ -0.15
DUX3Q96PT4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 AC009065.1-201ENST00000564055 1225 ntBASIC14.11□□□□□ -0.15
DUX3Q96PT4 MIR3180-4-201ENST00000582223 153 ntBASIC14.11□□□□□ -0.15
DUX3Q96PT4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 AL390719.2-201ENST00000606993 987 ntBASIC14.11□□□□□ -0.15
DUX3Q96PT4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.11□□□□□ -0.15
DUX3Q96PT4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DUX3Q96PT4 BX323043.1-201ENST00000641006 1765 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms