Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 AC067852.2-201ENST00000590513 2313 ntBASIC13.74□□□□□ -0.21
AP1S3Q96PC3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 PCDHA12-202ENST00000613593 2588 ntBASIC13.73□□□□□ -0.21
AP1S3Q96PC3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S3Q96PC3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 OR2I1P-209ENST00000641730 5365 ntBASIC13.72□□□□□ -0.21
AP1S3Q96PC3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 DUSP5P2-201ENST00000426873 1033 ntBASIC13.72□□□□□ -0.21
AP1S3Q96PC3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.72□□□□□ -0.21
AP1S3Q96PC3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms