Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.23■□□□□ 0.03
TIMD4Q96H15 NUS1P1-201ENST00000446295 882 ntBASIC15.23■□□□□ 0.03
TIMD4Q96H15 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 AL121772.3-201ENST00000610840 674 ntBASIC15.23■□□□□ 0.03
TIMD4Q96H15 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMD4Q96H15 AL024508.2-201ENST00000607749 1894 ntBASIC15.23■□□□□ 0.03
TIMD4Q96H15 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.23■□□□□ 0.03
TIMD4Q96H15 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 AL031598.1-201ENST00000561511 1773 ntBASIC15.22■□□□□ 0.03
TIMD4Q96H15 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 AC246785.2-201ENST00000432512 513 ntBASIC15.22■□□□□ 0.03
TIMD4Q96H15 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 TPM4P1-201ENST00000436100 807 ntBASIC15.22■□□□□ 0.03
TIMD4Q96H15 DUSP5P1-201ENST00000441325 1139 ntBASIC15.22■□□□□ 0.03
TIMD4Q96H15 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 AC074051.2-201ENST00000565115 352 ntBASIC15.22■□□□□ 0.03
TIMD4Q96H15 AC111152.3-201ENST00000569699 673 ntBASIC15.22■□□□□ 0.03
TIMD4Q96H15 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMD4Q96H15 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMD4Q96H15 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms