Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 MTCL1P1-201ENST00000446207 792 ntBASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 AC104819.1-201ENST00000504587 486 ntBASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 AC104581.1-202ENST00000635932 2618 ntBASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 KRT17P6-201ENST00000453795 1220 ntBASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 AC074051.2-201ENST00000565115 352 ntBASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 PRELID1P1-202ENST00000567272 903 ntBASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCD1Q96GM5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 AP005901.3-202ENST00000581653 237 ntBASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms