Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
FOXRED1Q96CU9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 KRT8P50-201ENST00000562022 1438 ntBASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 CR392000.1-201ENST00000624770 1228 ntBASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 AL049637.2-201ENST00000641778 930 ntBASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXRED1Q96CU9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 AL023284.2-201ENST00000405850 579 ntBASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 AC099398.1-201ENST00000567919 2776 ntBASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXRED1Q96CU9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 KRT18P55-202ENST00000578578 1546 ntBASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 MIR4785-201ENST00000585005 73 ntBASIC15.79■□□□□ 0.12
FOXRED1Q96CU9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms