Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 AC004263.2-201ENST00000617183 678 ntBASIC16.07■□□□□ 0.16
APH1AQ96BI3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 AL353692.3-201ENST00000407031 1396 ntBASIC16.07■□□□□ 0.16
APH1AQ96BI3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
APH1AQ96BI3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
APH1AQ96BI3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 TSSC2-201ENST00000450217 709 ntBASIC16.06■□□□□ 0.16
APH1AQ96BI3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 AC093458.2-201ENST00000623150 629 ntBASIC16.06■□□□□ 0.16
APH1AQ96BI3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.06■□□□□ 0.16
APH1AQ96BI3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APH1AQ96BI3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 CHCHD2P8-201ENST00000429873 447 ntBASIC16.05■□□□□ 0.16
APH1AQ96BI3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms