Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 AC005332.3-201ENST00000589904 676 ntBASIC16.29■□□□□ 0.2
CPNE4Q96A23 AL121672.3-201ENST00000608644 468 ntBASIC16.29■□□□□ 0.2
CPNE4Q96A23 AC069148.1-201ENST00000608741 768 ntBASIC16.29■□□□□ 0.2
CPNE4Q96A23 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 Z83836.1-201ENST00000624605 1642 ntBASIC16.29■□□□□ 0.2
CPNE4Q96A23 ESPNP-201ENST00000270691 2015 ntBASIC16.29■□□□□ 0.2
CPNE4Q96A23 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE4Q96A23 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE4Q96A23 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 LINC01126-201ENST00000623515 1646 ntBASIC16.28■□□□□ 0.2
CPNE4Q96A23 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 TSPY22P-201ENST00000427496 604 ntBASIC16.28■□□□□ 0.2
CPNE4Q96A23 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 BX276092.5-203ENST00000456199 560 ntBASIC16.28■□□□□ 0.2
CPNE4Q96A23 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 KRT8P26-201ENST00000534154 1276 ntBASIC16.28■□□□□ 0.2
CPNE4Q96A23 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 AL390719.2-201ENST00000606993 987 ntBASIC16.28■□□□□ 0.2
CPNE4Q96A23 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.28■□□□□ 0.2
CPNE4Q96A23 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 AC090164.3-201ENST00000610780 2143 ntBASIC16.28■□□□□ 0.2
CPNE4Q96A23 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE4Q96A23 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE4Q96A23 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE4Q96A23 RNF126P1-202ENST00000569893 925 ntBASIC16.27■□□□□ 0.2
CPNE4Q96A23 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms