Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.49■□□□□ 0.87
USP6NLQ92738 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 PMS2P2-201ENST00000425039 1128 ntBASIC20.49■□□□□ 0.87
USP6NLQ92738 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 AC040169.1-201ENST00000565382 521 ntBASIC20.49■□□□□ 0.87
USP6NLQ92738 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6NLQ92738 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6NLQ92738 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6NLQ92738 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6NLQ92738 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6NLQ92738 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
USP6NLQ92738 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6NLQ92738 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.48■□□□□ 0.87
USP6NLQ92738 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6NLQ92738 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6NLQ92738 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6NLQ92738 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.48■□□□□ 0.87
USP6NLQ92738 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6NLQ92738 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 AL355385.1-201ENST00000606123 409 ntBASIC20.48■□□□□ 0.87
USP6NLQ92738 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
USP6NLQ92738 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
USP6NLQ92738 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6NLQ92738 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
USP6NLQ92738 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6NLQ92738 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6NLQ92738 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 AC093484.2-201ENST00000580996 2166 ntBASIC20.48■□□□□ 0.87
USP6NLQ92738 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6NLQ92738 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
USP6NLQ92738 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
USP6NLQ92738 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.47■□□□□ 0.87
USP6NLQ92738 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 AL161938.1-201ENST00000569833 2180 ntBASIC20.47■□□□□ 0.87
USP6NLQ92738 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
USP6NLQ92738 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.47■□□□□ 0.87
USP6NLQ92738 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 AC004832.2-201ENST00000426397 482 ntBASIC20.47■□□□□ 0.87
USP6NLQ92738 AC112698.1-201ENST00000510299 916 ntBASIC20.47■□□□□ 0.87
USP6NLQ92738 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.47■□□□□ 0.87
USP6NLQ92738 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
USP6NLQ92738 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.47■□□□□ 0.87
USP6NLQ92738 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.47■□□□□ 0.87
USP6NLQ92738 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.47■□□□□ 0.87
USP6NLQ92738 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.47■□□□□ 0.87
USP6NLQ92738 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.47■□□□□ 0.87
USP6NLQ92738 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6NLQ92738 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP6NLQ92738 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP6NLQ92738 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
USP6NLQ92738 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.46■□□□□ 0.87
USP6NLQ92738 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP6NLQ92738 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP6NLQ92738 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
USP6NLQ92738 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP6NLQ92738 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.46■□□□□ 0.87
USP6NLQ92738 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP6NLQ92738 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP6NLQ92738 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.46■□□□□ 0.87
USP6NLQ92738 DNAJB3-201ENST00000446806 729 ntBASIC20.46■□□□□ 0.87
USP6NLQ92738 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP6NLQ92738 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP6NLQ92738 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.46■□□□□ 0.87
USP6NLQ92738 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.46■□□□□ 0.87
USP6NLQ92738 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP6NLQ92738 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms