Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 DRAXINP1-201ENST00000437611 948 ntBASIC21.35■■□□□ 1.01
STAG1Q8WVM7 AC068472.1-201ENST00000474589 881 ntBASIC21.35■■□□□ 1.01
STAG1Q8WVM7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 TPSP2-201ENST00000561760 610 ntBASIC21.35■■□□□ 1.01
STAG1Q8WVM7 AL353801.3-201ENST00000609898 542 ntBASIC21.35■■□□□ 1.01
STAG1Q8WVM7 IGHV3-41-201ENST00000613121 348 ntBASIC21.35■■□□□ 1.01
STAG1Q8WVM7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 AC124864.1-201ENST00000623408 392 ntBASIC21.34■■□□□ 1.01
STAG1Q8WVM7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.34■■□□□ 1.01
STAG1Q8WVM7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 KRT18P1-202ENST00000452408 1331 ntBASIC21.33■■□□□ 1.01
STAG1Q8WVM7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
STAG1Q8WVM7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.33■■□□□ 1
STAG1Q8WVM7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.33■■□□□ 1
STAG1Q8WVM7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.33■■□□□ 1
STAG1Q8WVM7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
STAG1Q8WVM7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.33■■□□□ 1
STAG1Q8WVM7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
STAG1Q8WVM7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.32■■□□□ 1
STAG1Q8WVM7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.32■■□□□ 1
STAG1Q8WVM7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.32■■□□□ 1
STAG1Q8WVM7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.32■■□□□ 1
STAG1Q8WVM7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.32■■□□□ 1
STAG1Q8WVM7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
STAG1Q8WVM7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.32■■□□□ 1
STAG1Q8WVM7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.32■■□□□ 1
STAG1Q8WVM7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.32■■□□□ 1
STAG1Q8WVM7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.32■■□□□ 1
STAG1Q8WVM7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.32■■□□□ 1
STAG1Q8WVM7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
STAG1Q8WVM7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.32■■□□□ 1
STAG1Q8WVM7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.32■■□□□ 1
STAG1Q8WVM7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
STAG1Q8WVM7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.32■■□□□ 1
STAG1Q8WVM7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
STAG1Q8WVM7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.31■■□□□ 1
STAG1Q8WVM7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STAG1Q8WVM7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms