Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AL732292.2-201ENST00000609649 430 ntBASIC18.31■□□□□ 0.52
CHD5Q8TDI0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHD5Q8TDI0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD5Q8TDI0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD5Q8TDI0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.31■□□□□ 0.52
CHD5Q8TDI0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 AC068472.1-201ENST00000474589 881 ntBASIC18.3■□□□□ 0.52
CHD5Q8TDI0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 DUTP2-201ENST00000519164 463 ntBASIC18.3■□□□□ 0.52
CHD5Q8TDI0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD5Q8TDI0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 AP000997.3-201ENST00000623333 2250 ntBASIC18.29■□□□□ 0.52
CHD5Q8TDI0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 LINC00265-3P-201ENST00000447588 903 ntBASIC18.29■□□□□ 0.52
CHD5Q8TDI0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 KRT18P56-201ENST00000507275 550 ntBASIC18.29■□□□□ 0.52
CHD5Q8TDI0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD5Q8TDI0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 AC011840.4-201ENST00000578471 627 ntBASIC18.28■□□□□ 0.52
CHD5Q8TDI0 AC012313.10-201ENST00000623509 926 ntBASIC18.28■□□□□ 0.52
CHD5Q8TDI0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHD5Q8TDI0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms