Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AL691432.2-201ENST00000607222 2038 ntBASIC16.23■□□□□ 0.19
CHD6Q8TD26 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 KRT8P47-201ENST00000604727 1398 ntBASIC16.22■□□□□ 0.19
CHD6Q8TD26 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 AC092580.3-201ENST00000430932 139 ntBASIC16.22■□□□□ 0.19
CHD6Q8TD26 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD6Q8TD26 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 AC112492.5-201ENST00000421897 457 ntBASIC16.22■□□□□ 0.19
CHD6Q8TD26 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHD6Q8TD26 Z98882.1-201ENST00000622160 2253 ntBASIC16.22■□□□□ 0.19
CHD6Q8TD26 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 KRT8P23-201ENST00000560090 1207 ntBASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC084121.4-201ENST00000641598 221 ntBASIC16.21■□□□□ 0.19
CHD6Q8TD26 AF228730.8-201ENST00000642140 221 ntBASIC16.21■□□□□ 0.19
CHD6Q8TD26 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 DGCR5-201ENST00000399539 862 ntBASIC16.21■□□□□ 0.19
CHD6Q8TD26 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC023141.13-201ENST00000604991 943 ntBASIC16.21■□□□□ 0.19
CHD6Q8TD26 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD6Q8TD26 AC007225.1-201ENST00000566331 1836 ntBASIC16.21■□□□□ 0.18
CHD6Q8TD26 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.21■□□□□ 0.18
CHD6Q8TD26 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 AC112191.1-201ENST00000523689 701 ntBASIC16.2■□□□□ 0.18
CHD6Q8TD26 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHD6Q8TD26 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.2■□□□□ 0.18
CHD6Q8TD26 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD6Q8TD26 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 AC099522.2-201ENST00000607001 744 ntBASIC16.19■□□□□ 0.18
CHD6Q8TD26 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms