Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 AC008403.3-201ENST00000598924 454 ntBASIC17.66■□□□□ 0.42
HIPK4Q8NE63 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.65■□□□□ 0.42
HIPK4Q8NE63 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 MYC-208ENST00000641036 567 ntBASIC17.65■□□□□ 0.42
HIPK4Q8NE63 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 KRT8P41-201ENST00000533985 1514 ntBASIC17.65■□□□□ 0.42
HIPK4Q8NE63 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK4Q8NE63 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIPK4Q8NE63 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.64■□□□□ 0.42
HIPK4Q8NE63 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 KRT17P3-201ENST00000420566 1262 ntBASIC17.64■□□□□ 0.41
HIPK4Q8NE63 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 MTDHP1-201ENST00000605323 784 ntBASIC17.64■□□□□ 0.41
HIPK4Q8NE63 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK4Q8NE63 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms