Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM2Q8N967 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRTM2Q8N967 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LRTM2Q8N967 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM2Q8N967 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM2Q8N967 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM2Q8N967 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LRTM2Q8N967 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM2Q8N967 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM2Q8N967 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM2Q8N967 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LRTM2Q8N967 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM2Q8N967 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
LRTM2Q8N967 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.83□□□□□ -0.03
LRTM2Q8N967 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 KSR1P1-201ENST00000446298 240 ntBASIC14.83□□□□□ -0.04
LRTM2Q8N967 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.83□□□□□ -0.04
LRTM2Q8N967 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 AC098934.4-201ENST00000564127 592 ntBASIC14.83□□□□□ -0.04
LRTM2Q8N967 AC008403.3-201ENST00000598924 454 ntBASIC14.83□□□□□ -0.04
LRTM2Q8N967 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.83□□□□□ -0.04
LRTM2Q8N967 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.83□□□□□ -0.04
LRTM2Q8N967 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.83□□□□□ -0.04
LRTM2Q8N967 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM2Q8N967 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.83□□□□□ -0.04
LRTM2Q8N967 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 LINC01126-201ENST00000623515 1646 ntBASIC14.82□□□□□ -0.04
LRTM2Q8N967 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 GPAT2P1-201ENST00000444924 1672 ntBASIC14.82□□□□□ -0.04
LRTM2Q8N967 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 AC069544.1-201ENST00000609399 999 ntBASIC14.82□□□□□ -0.04
LRTM2Q8N967 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 AC130371.2-201ENST00000619443 611 ntBASIC14.82□□□□□ -0.04
LRTM2Q8N967 AC133041.1-202ENST00000642053 222 ntBASIC14.82□□□□□ -0.04
LRTM2Q8N967 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM2Q8N967 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRTM2Q8N967 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM2Q8N967 AC036111.1-201ENST00000533973 1582 ntBASIC14.81□□□□□ -0.04
LRTM2Q8N967 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms