Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 MIR149-201ENST00000384879 89 ntBASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
NANOGP1Q8N7R0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 AL023284.2-201ENST00000405850 579 ntBASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 NIFKP9-201ENST00000419265 221 ntBASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 NCF1B-203ENST00000435988 1254 ntBASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 AC098934.4-201ENST00000564127 592 ntBASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 IKBKGP1-201ENST00000612193 1073 ntBASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NANOGP1Q8N7R0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.17■□□□□ 0.18
NANOGP1Q8N7R0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms