Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 AC116407.3-201ENST00000623905 1129 ntBASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.42■□□□□ 0.54
SYNPOQ8N3V7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 AC093503.3-201ENST00000624917 2352 ntBASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 AC145285.3-201ENST00000564603 959 ntBASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 AC011467.2-201ENST00000598425 242 ntBASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 AL049840.3-201ENST00000602669 611 ntBASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 AL138831.2-201ENST00000606564 490 ntBASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNPOQ8N3V7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 AP001269.4-201ENST00000609611 512 ntBASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 AP005117.1-201ENST00000584346 1413 ntBASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 AIRN-201ENST00000601203 4374 ntBASIC18.4■□□□□ 0.54
SYNPOQ8N3V7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.39■□□□□ 0.54
SYNPOQ8N3V7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SYNPOQ8N3V7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.39■□□□□ 0.54
SYNPOQ8N3V7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 HNRNPDP1-201ENST00000439535 754 ntBASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 MTCL1P1-201ENST00000446207 792 ntBASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 AC092183.1-201ENST00000469884 875 ntBASIC18.39■□□□□ 0.53
SYNPOQ8N3V7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms