Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01561Q8N1V8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 AL391005.1-201ENST00000623953 2435 ntBASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 AC116562.2-201ENST00000507042 360 ntBASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 AC073648.6-201ENST00000641589 218 ntBASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01561Q8N1V8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 KRT18P23-201ENST00000435622 1283 ntBASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 WWOX-216ENST00000569818 525 ntBASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01561Q8N1V8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms