Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 AC004817.3-201ENST00000602957 2129 ntBASIC25.06■■□□□ 1.6
XRN1Q8IZH2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 AL035633.1-201ENST00000406139 838 ntBASIC25.05■■□□□ 1.6
XRN1Q8IZH2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 AL589182.2-201ENST00000619332 1049 ntBASIC25.05■■□□□ 1.6
XRN1Q8IZH2 AC004706.3-202ENST00000621574 984 ntBASIC25.05■■□□□ 1.6
XRN1Q8IZH2 AC010507.1-201ENST00000633895 436 ntBASIC25.05■■□□□ 1.6
XRN1Q8IZH2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
XRN1Q8IZH2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 MIR4751-201ENST00000578027 74 ntBASIC25.04■■□□□ 1.6
XRN1Q8IZH2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 AC093484.2-201ENST00000580996 2166 ntBASIC25.04■■□□□ 1.6
XRN1Q8IZH2 GPR89P-201ENST00000407924 1495 ntBASIC25.04■■□□□ 1.6
XRN1Q8IZH2 AL353593.2-201ENST00000602529 1483 ntBASIC25.04■■□□□ 1.6
XRN1Q8IZH2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC25.04■■□□□ 1.6
XRN1Q8IZH2 BID-204ENST00000399767 2129 ntTSL 2 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 KLF4P1-201ENST00000412782 1185 ntBASIC25.03■■□□□ 1.6
XRN1Q8IZH2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC25.03■■□□□ 1.6
XRN1Q8IZH2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 PDPK2P-202ENST00000562415 1191 ntBASIC25.02■■□□□ 1.6
XRN1Q8IZH2 AC008667.4-201ENST00000607370 168 ntBASIC25.02■■□□□ 1.6
XRN1Q8IZH2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
XRN1Q8IZH2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 AC010654.1-201ENST00000615722 808 ntBASIC25.01■■□□□ 1.59
XRN1Q8IZH2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 AL805961.1-202ENST00000641562 540 ntBASIC25.01■■□□□ 1.59
XRN1Q8IZH2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC25.01■■□□□ 1.59
XRN1Q8IZH2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
XRN1Q8IZH2 CRYGEP-201ENST00000412192 528 ntBASIC25■■□□□ 1.59
XRN1Q8IZH2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC25■■□□□ 1.59
XRN1Q8IZH2 AP000344.2-201ENST00000512987 629 ntBASIC25■■□□□ 1.59
XRN1Q8IZH2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
XRN1Q8IZH2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms