Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCUBE3Q8IX30 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 IGHGP-201ENST00000390555 1178 ntBASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 AC113404.2-201ENST00000507884 177 ntBASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 AC004263.2-201ENST00000617183 678 ntBASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 AL358472.4-201ENST00000633140 710 ntBASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 AC132938.6-201ENST00000623828 1655 ntBASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.08■□□□□ 0.64
SCUBE3Q8IX30 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 Z83836.1-201ENST00000624605 1642 ntBASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 AC011498.5-201ENST00000592027 486 ntBASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 AC093010.1-201ENST00000473625 1624 ntBASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCUBE3Q8IX30 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 KRT126P-201ENST00000549467 1181 ntBASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 GPR32P1-201ENST00000601788 811 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms