Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 RCN1P2-201ENST00000398357 915 ntBASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 AC004408.2-201ENST00000623613 2777 ntBASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE3BQ7Z3V4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 AC093010.1-201ENST00000473625 1624 ntBASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 AC125634.1-201ENST00000438758 1403 ntBASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
UBE3BQ7Z3V4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 EMD-201ENST00000369835 966 ntTSL 3 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 AF238378.1-201ENST00000526806 358 ntBASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 AL591684.3-201ENST00000605187 298 ntBASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.55■■□□□ 1.2
UBE3BQ7Z3V4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 SAPCD2P3-201ENST00000455031 850 ntBASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 AL160237.2-201ENST00000556165 472 ntBASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 AL121912.1-201ENST00000603683 238 ntBASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.54■■□□□ 1.2
UBE3BQ7Z3V4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBE3BQ7Z3V4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.53■■□□□ 1.2
UBE3BQ7Z3V4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UBE3BQ7Z3V4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.53■■□□□ 1.2
UBE3BQ7Z3V4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.53■■□□□ 1.2
UBE3BQ7Z3V4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
UBE3BQ7Z3V4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UBE3BQ7Z3V4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.53■■□□□ 1.2
UBE3BQ7Z3V4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms