Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BHLHA9Q7RTU4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BHLHA9Q7RTU4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BHLHA9Q7RTU4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
BHLHA9Q7RTU4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.8■□□□□ 0.6
BHLHA9Q7RTU4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BHLHA9Q7RTU4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 AC100803.2-201ENST00000562459 1963 ntBASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 AC011840.4-201ENST00000578471 627 ntBASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 NSUN5P1-202ENST00000421140 1535 ntBASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 NSUN5P2-203ENST00000457352 1529 ntBASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BHLHA9Q7RTU4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 AC074051.2-201ENST00000565115 352 ntBASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 BNIP3P18-201ENST00000593976 575 ntBASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 Z69720.1-201ENST00000601483 472 ntBASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 AL138831.2-201ENST00000606564 490 ntBASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.78■□□□□ 0.6
BHLHA9Q7RTU4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 AC125634.1-201ENST00000438758 1403 ntBASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 MIR3652-201ENST00000579335 131 ntBASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.77■□□□□ 0.6
BHLHA9Q7RTU4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
BHLHA9Q7RTU4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
BHLHA9Q7RTU4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
BHLHA9Q7RTU4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BHLHA9Q7RTU4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BHLHA9Q7RTU4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms