Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 FAM207BP-201ENST00000447172 505 ntBASIC16.78■□□□□ 0.28
TUBA1AQ71U36 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 SLC25A1P4-201ENST00000567977 778 ntBASIC16.78■□□□□ 0.28
TUBA1AQ71U36 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 PKD1P1-201ENST00000458669 6805 ntBASIC16.78■□□□□ 0.28
TUBA1AQ71U36 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TUBA1AQ71U36 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 UNC93B2-201ENST00000285383 730 ntBASIC16.77■□□□□ 0.28
TUBA1AQ71U36 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 MIR1238-201ENST00000408483 83 ntBASIC16.77■□□□□ 0.28
TUBA1AQ71U36 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 AC130371.2-201ENST00000619443 611 ntBASIC16.77■□□□□ 0.28
TUBA1AQ71U36 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBA1AQ71U36 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
TUBA1AQ71U36 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TUBA1AQ71U36 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBA1AQ71U36 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBA1AQ71U36 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TUBA1AQ71U36 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.77■□□□□ 0.27
TUBA1AQ71U36 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBA1AQ71U36 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 CRYGFP-201ENST00000418459 633 ntBASIC16.76■□□□□ 0.27
TUBA1AQ71U36 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 BX088651.1-201ENST00000540551 451 ntBASIC16.76■□□□□ 0.27
TUBA1AQ71U36 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBA1AQ71U36 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms