Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAPH1Q70E73 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.27■□□□□ 0.52
RAPH1Q70E73 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.27■□□□□ 0.52
RAPH1Q70E73 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.27■□□□□ 0.52
RAPH1Q70E73 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.27■□□□□ 0.52
RAPH1Q70E73 AC113410.3-201ENST00000623366 203 ntBASIC18.27■□□□□ 0.52
RAPH1Q70E73 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAPH1Q70E73 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.27■□□□□ 0.51
RAPH1Q70E73 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
RAPH1Q70E73 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RAPH1Q70E73 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAPH1Q70E73 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RAPH1Q70E73 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAPH1Q70E73 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 AC012618.2-201ENST00000428058 849 ntBASIC18.26■□□□□ 0.51
RAPH1Q70E73 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 AL049637.2-201ENST00000641778 930 ntBASIC18.26■□□□□ 0.51
RAPH1Q70E73 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAPH1Q70E73 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RAPH1Q70E73 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 AC036111.1-201ENST00000533973 1582 ntBASIC18.25■□□□□ 0.51
RAPH1Q70E73 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 FLJ13224-201ENST00000313737 1514 ntBASIC18.25■□□□□ 0.51
RAPH1Q70E73 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 AC233702.5-201ENST00000584107 538 ntBASIC18.25■□□□□ 0.51
RAPH1Q70E73 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAPH1Q70E73 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.25■□□□□ 0.51
RAPH1Q70E73 PHGDH-209ENST00000641074 1780 ntBASIC18.25■□□□□ 0.51
RAPH1Q70E73 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 GCSHP5-201ENST00000443090 522 ntBASIC18.24■□□□□ 0.51
RAPH1Q70E73 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 AC026471.5-201ENST00000615068 467 ntBASIC18.24■□□□□ 0.51
RAPH1Q70E73 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RAPH1Q70E73 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAPH1Q70E73 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms