Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 CNN2P6-201ENST00000439038 900 ntBASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM88Q6PEY1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 AC106886.4-201ENST00000623557 2502 ntBASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms