Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.51■■□□□ 1.03
CTR9Q6PD62 AL450487.1-201ENST00000426799 995 ntBASIC21.51■■□□□ 1.03
CTR9Q6PD62 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 AC074051.2-201ENST00000565115 352 ntBASIC21.51■■□□□ 1.03
CTR9Q6PD62 PRELID1P1-202ENST00000567272 903 ntBASIC21.51■■□□□ 1.03
CTR9Q6PD62 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTR9Q6PD62 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTR9Q6PD62 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CTR9Q6PD62 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
CTR9Q6PD62 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.5■■□□□ 1.03
CTR9Q6PD62 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CTR9Q6PD62 KRT17P6-201ENST00000453795 1220 ntBASIC21.5■■□□□ 1.03
CTR9Q6PD62 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.5■■□□□ 1.03
CTR9Q6PD62 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.5■■□□□ 1.03
CTR9Q6PD62 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTR9Q6PD62 AC009154.2-201ENST00000621177 724 ntBASIC21.5■■□□□ 1.03
CTR9Q6PD62 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTR9Q6PD62 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTR9Q6PD62 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.5■■□□□ 1.03
CTR9Q6PD62 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTR9Q6PD62 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTR9Q6PD62 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 AC104819.1-201ENST00000504587 486 ntBASIC21.49■■□□□ 1.03
CTR9Q6PD62 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 AC011840.4-201ENST00000578471 627 ntBASIC21.49■■□□□ 1.03
CTR9Q6PD62 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 Z69720.1-201ENST00000601483 472 ntBASIC21.49■■□□□ 1.03
CTR9Q6PD62 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CTR9Q6PD62 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTR9Q6PD62 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 AC246785.2-201ENST00000432512 513 ntBASIC21.48■■□□□ 1.03
CTR9Q6PD62 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms