Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 NKILA-202ENST00000614771 2598 ntBASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 AC011676.5-201ENST00000624864 2660 ntBASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 FP475955.4-201ENST00000623131 1990 ntBASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 MIR4497-201ENST00000583208 89 ntBASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 AP000692.2-201ENST00000608391 879 ntBASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 REXO1L10P-201ENST00000615707 1290 ntBASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 REXO1L12P-201ENST00000622156 912 ntBASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM53Q6P2H8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 KRT8P11-201ENST00000409686 1436 ntBASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 SLC25A1P4-201ENST00000567977 778 ntBASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 AL662844.4-201ENST00000606367 2838 ntBASIC16.65■□□□□ 0.26
TMEM53Q6P2H8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
TMEM53Q6P2H8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms