Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 AC026396.1-201ENST00000419388 421 ntBASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 FAAHP1-202ENST00000446499 1238 ntBASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3CQ6NXT2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 TSPY12P-201ENST00000421279 868 ntBASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 AC068472.1-201ENST00000474589 881 ntBASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 AC091607.1-201ENST00000490318 1060 ntBASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 IFNL4P1-201ENST00000607083 540 ntBASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 AL732292.2-201ENST00000609649 430 ntBASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 NSUN5P1-202ENST00000421140 1535 ntBASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 NSUN5P2-203ENST00000457352 1529 ntBASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H3F3CQ6NXT2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 AC004870.1-201ENST00000315132 882 ntBASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 AC099336.1-202ENST00000602961 463 ntBASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 AC009154.2-201ENST00000621177 724 ntBASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms