Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 AL049812.1-201ENST00000432563 2267 ntBASIC16.39■□□□□ 0.21
RTL6Q6ICC9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 AC004870.1-201ENST00000315132 882 ntBASIC16.39■□□□□ 0.21
RTL6Q6ICC9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 FOSL1P1-201ENST00000511041 816 ntBASIC16.39■□□□□ 0.21
RTL6Q6ICC9 AC009065.1-201ENST00000564055 1225 ntBASIC16.39■□□□□ 0.21
RTL6Q6ICC9 IFNL4P1-201ENST00000607083 540 ntBASIC16.39■□□□□ 0.21
RTL6Q6ICC9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.39■□□□□ 0.21
RTL6Q6ICC9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 RN7SL606P-201ENST00000472779 293 ntBASIC16.38■□□□□ 0.21
RTL6Q6ICC9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 AL163051.1-201ENST00000569214 1512 ntBASIC16.38■□□□□ 0.21
RTL6Q6ICC9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 AC233702.3-201ENST00000578656 1387 ntBASIC16.38■□□□□ 0.21
RTL6Q6ICC9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RTL6Q6ICC9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 KRT89P-201ENST00000620027 1478 ntBASIC16.37■□□□□ 0.21
RTL6Q6ICC9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 EMBP1-201ENST00000458200 901 ntBASIC16.37■□□□□ 0.21
RTL6Q6ICC9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 AL592071.1-201ENST00000611956 408 ntBASIC16.37■□□□□ 0.21
RTL6Q6ICC9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL6Q6ICC9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTL6Q6ICC9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms