Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 AL031133.1-201ENST00000406807 723 ntBASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 VENTXP5-201ENST00000523979 775 ntBASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 HYMAI.1-201ENST00000620949 238 ntBASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 AL020996.1-203ENST00000536896 2307 ntBASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA1Q5Y7H0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 AC083849.1-201ENST00000615227 514 ntBASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 ESPNP-201ENST00000270691 2015 ntBASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA1Q5Y7H0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 AP003733.1-201ENST00000491725 852 ntBASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA1Q5Y7H0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms