Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 AC010460.3-201ENST00000511359 1579 ntBASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 PRYP5-201ENST00000451909 266 ntBASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 IGHV3-65-201ENST00000523210 341 ntBASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 AC148477.5-201ENST00000625164 1645 ntBASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 AC019129.2-201ENST00000609837 1235 ntBASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
VPS13DQ5THJ4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
VPS13DQ5THJ4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
VPS13DQ5THJ4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 SPCS2P1-201ENST00000561636 679 ntBASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 AC008735.5-201ENST00000623544 497 ntBASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 IGLL3P-201ENST00000412472 434 ntBASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 AC136632.2-201ENST00000512891 861 ntBASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13DQ5THJ4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 AC040169.1-201ENST00000565382 521 ntBASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 AC106028.4-201ENST00000614509 607 ntBASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 ANO7L1-203ENST00000602586 1720 ntBASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 SPDYE21P-201ENST00000413323 827 ntBASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.13□□□□□ -0.47
VPS13DQ5THJ4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms