Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 ABALON-201ENST00000629058 1903 ntBASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 AC104390.1-201ENST00000555663 520 ntBASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 TPSP2-201ENST00000561760 610 ntBASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 AC010240.3-201ENST00000607688 395 ntBASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC144BQ3MJ40 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 KRT8P7-201ENST00000533003 1432 ntBASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 HOXB1-202ENST00000577092 1414 ntBASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 DRAXINP1-201ENST00000437611 948 ntBASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144BQ3MJ40 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 FAAHP1-202ENST00000446499 1238 ntBASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 IFNL4P1-201ENST00000607083 540 ntBASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144BQ3MJ40 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 LINC00265-3P-201ENST00000447588 903 ntBASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 KRT17P6-201ENST00000453795 1220 ntBASIC21.04■□□□□ 0.96
CCDC144BQ3MJ40 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms