Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
HMGXB3Q12766 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
HMGXB3Q12766 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
HMGXB3Q12766 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
HMGXB3Q12766 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
HMGXB3Q12766 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
HMGXB3Q12766 AC023141.5-201ENST00000458585 616 ntBASIC31.72■■■□□ 2.67
HMGXB3Q12766 AC015911.4-201ENST00000588022 1070 ntBASIC31.72■■■□□ 2.67
HMGXB3Q12766 Z92544.3-201ENST00000624747 417 ntBASIC31.72■■■□□ 2.67
HMGXB3Q12766 AC092902.6-201ENST00000641783 218 ntBASIC31.72■■■□□ 2.67
HMGXB3Q12766 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
HMGXB3Q12766 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC31.72■■■□□ 2.67
HMGXB3Q12766 AC099343.3-201ENST00000605834 2503 ntBASIC31.72■■■□□ 2.67
HMGXB3Q12766 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
HMGXB3Q12766 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
HMGXB3Q12766 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
HMGXB3Q12766 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
HMGXB3Q12766 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGXB3Q12766 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
HMGXB3Q12766 MRPL20P1-201ENST00000400819 433 ntBASIC31.71■■■□□ 2.67
HMGXB3Q12766 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC31.71■■■□□ 2.67
HMGXB3Q12766 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
HMGXB3Q12766 AC004790.2-201ENST00000623588 572 ntBASIC31.71■■■□□ 2.67
HMGXB3Q12766 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGXB3Q12766 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGXB3Q12766 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGXB3Q12766 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGXB3Q12766 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGXB3Q12766 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGXB3Q12766 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 AL020989.1-201ENST00000422979 469 ntBASIC31.7■■■□□ 2.67
HMGXB3Q12766 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
HMGXB3Q12766 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
HMGXB3Q12766 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC31.7■■■□□ 2.67
HMGXB3Q12766 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
HMGXB3Q12766 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
HMGXB3Q12766 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.66
HMGXB3Q12766 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC31.7■■■□□ 2.66
HMGXB3Q12766 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC31.7■■■□□ 2.66
HMGXB3Q12766 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
HMGXB3Q12766 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC31.7■■■□□ 2.66
HMGXB3Q12766 AC004461.1-201ENST00000412461 403 ntBASIC31.7■■■□□ 2.66
HMGXB3Q12766 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.66
HMGXB3Q12766 AC109322.1-201ENST00000524499 1264 ntBASIC31.7■■■□□ 2.66
HMGXB3Q12766 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC31.7■■■□□ 2.66
HMGXB3Q12766 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
HMGXB3Q12766 AJ011932.1-201ENST00000621707 465 ntBASIC31.7■■■□□ 2.66
HMGXB3Q12766 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC31.69■■■□□ 2.66
HMGXB3Q12766 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
HMGXB3Q12766 KLF4P1-201ENST00000412782 1185 ntBASIC31.69■■■□□ 2.66
HMGXB3Q12766 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC31.69■■■□□ 2.66
HMGXB3Q12766 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
HMGXB3Q12766 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC31.69■■■□□ 2.66
HMGXB3Q12766 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC31.69■■■□□ 2.66
HMGXB3Q12766 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC31.69■■■□□ 2.66
HMGXB3Q12766 AC138761.1-201ENST00000584393 385 ntBASIC31.69■■■□□ 2.66
HMGXB3Q12766 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC31.69■■■□□ 2.66
HMGXB3Q12766 AC022145.2-201ENST00000598203 171 ntBASIC31.69■■■□□ 2.66
HMGXB3Q12766 AL390955.2-201ENST00000603032 514 ntBASIC31.69■■■□□ 2.66
HMGXB3Q12766 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
HMGXB3Q12766 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
HMGXB3Q12766 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
HMGXB3Q12766 LINC01006-201ENST00000333319 2292 ntBASIC31.68■■■□□ 2.66
HMGXB3Q12766 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
HMGXB3Q12766 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
HMGXB3Q12766 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC31.68■■■□□ 2.66
HMGXB3Q12766 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
HMGXB3Q12766 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC31.68■■■□□ 2.66
HMGXB3Q12766 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
HMGXB3Q12766 CD99-202ENST00000381180 530 ntTSL 2 BASIC31.68■■■□□ 2.66
HMGXB3Q12766 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
HMGXB3Q12766 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
HMGXB3Q12766 PUDP-206ENST00000540122 825 ntTSL 2 BASIC31.68■■■□□ 2.66
HMGXB3Q12766 AC096734.2-201ENST00000562054 433 ntBASIC31.68■■■□□ 2.66
HMGXB3Q12766 OR7E47P-204ENST00000575924 449 ntBASIC31.68■■■□□ 2.66
HMGXB3Q12766 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
HMGXB3Q12766 GID4-202ENST00000376345 1391 ntTSL 3 BASIC31.68■■■□□ 2.66
HMGXB3Q12766 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
HMGXB3Q12766 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC31.68■■■□□ 2.66
HMGXB3Q12766 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
HMGXB3Q12766 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
HMGXB3Q12766 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
HMGXB3Q12766 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
HMGXB3Q12766 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 CYB561-217ENST00000582997 877 ntTSL 5 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 AC009093.7-201ENST00000623853 1223 ntBASIC31.67■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms